Information for 14-AATAGCCCGG (Motif 12)

C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
Reverse Opposite:
A G T C A G T C C T A G C T A G A C T G A G T C A C G T G C T A A C G T A G C T
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.871
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.8 +/- 18.9bp
Average Position of motif in Background53.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATAGCCCGG
CCAAAAATAG-----
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AATAGCCCGG
DCYAAAAATAGM----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AATAGCCCGG
KCCAAAAATAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AATAGCCCGG
--CAGCC---
 C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATAGCCCGG
GCTAAAAATAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AATAGCCCGG
GCTATAAATAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AATAGCCCGG
GTTAATGGCC---
 A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------AATAGCCCGG
ATGCTAAAAATAGAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AATAGCCCGG
ACTATAAATAGA----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AATAGCCCGG----
ACATGCCCGGGCAT
 C T G A C G T A C G A T C G T A A C T G A G T C A G T C G A T C A C T G A C T G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T