Information for 14-CCRCGTSTCA (Motif 17)

A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
Reverse Opposite:
A G C T A C T G G T C A A T G C G C T A T A G C A C T G A G C T A T C G T C A G
p-value:1e-6
log p-value:-1.411e+01
Information Content per bp:1.684
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.20%
Number of Background Sequences with motif1063.6
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets47.2 +/- 25.7bp
Average Position of motif in Background50.6 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Creb3l2/MA0608.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCRCGTSTCA
ACACGTGGC-
 A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCRCGTSTCA
GGCACGTGNC-
 A C G T A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCRCGTSTCA
-CACGTGDC-
 A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

Npas2/MA0626.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCRCGTSTCA
GGCACGTGTC-
 A C G T A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCRCGTSTCA
NCCACGTG---
 A C G T A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCRCGTSTCA
GCCACGTG---
 A C G T A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCRCGTSTCA-
NNGTCGCGTGNCAC
 A C G T A C G T A C G T A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCRCGTSTCA-
---CCTGTCAA
 A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCRCGTSTCA
-CACGTGNC-
 A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCRCGTSTCA-
----NTGTCAN
 A G T C A T G C T C G A T G A C A T C G C G A T A T C G C A G T A G T C C T G A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A