Information for 9-AAGTGCGCCCTGG (Motif 10)

C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
Reverse Opposite:
A G T C A T G C C G T A A T C G T A C G A C T G A G T C T A C G A G T C G T C A A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.288e+01
Information Content per bp:1.828
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.3 +/- 22.6bp
Average Position of motif in Background44.7 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCGCCCTGG
NTCAAGTGGN------
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCGCCCTGG
NTCAAGTGG-------
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGCCCTGG
TTAAGTGGN------
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGCCCTGG
TTAAGTGGT------
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGCCCTGG
TTAAGTGC-------
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGTGCGCCCTGG--
AAGGKGRCGCAGGCA
 C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGCCCTGG
TTGAGTGSTT-----
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGCCCTGG-
NNNGGGGCGCCCCCNN
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGTGCGCCCTGG
BTBRAGTGSN------
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGCGCCCTGG-
ANCGCGCGCCCTTNN
 A C G T C G T A C G T A A C T G A C G T A C T G A T G C A C T G A G T C A T G C A T G C C G A T A T C G A C T G A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T