Information for 8-GAAACTAGTT (Motif 11)

C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T
Reverse Opposite:
G C T A G T C A A T G C C A G T G T C A T C A G C A G T A C G T A G C T G A T C
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.643
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.28%
Number of Background Sequences with motif1000.9
Percentage of Background Sequences with motif2.09%
Average Position of motif in Targets47.1 +/- 29.9bp
Average Position of motif in Background51.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAAACTAGTT------
GAAAACTAGTTAACATC
 A C G T C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAACTAGTT--
AAAACCGGTTTT
 C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PH0028.1_En1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAACTAGTT-----
GCGAACTAATTAATGC
 A C G T C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAAACTAGTT-
-AAACCGGTTT
 C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

Lhx3/MA0135.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAAACTAGTT----
-AAATTAATTAATC
 C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T A C G T
A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PH0092.1_Lhx2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAACTAGTT-------
TAAACTAATTAGTGAAC
 C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

PB0136.1_IRC900814_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAAACTAGTT---
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PH0108.1_Msx3/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAACTAGTT-----
CAAAACCAATTAATTT
 A C G T C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0149.1_Pou3f4/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAACTAGTT-----
AATTAATTAATTAATTC
 A C G T A C G T C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAAACTAGTT---
---ACTAGTTAAC
 C T A G C T G A C G T A G T C A A G T C C A G T G T C A T A C G C A G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C