Information for 5-RCTTTTTGGCTCCCTG (Motif 8)

T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
Reverse Opposite:
A T G C C G T A A T C G T C A G A T C G C G T A C T A G A G T C A G T C G T C A G T C A C G T A C T G A C G T A A C T G A G T C
p-value:1e-12
log p-value:-2.947e+01
Information Content per bp:1.703
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.2 +/- 17.3bp
Average Position of motif in Background59.0 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RCTTTTTGGCTCCCTG
-TTTTATGGCTN----
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RCTTTTTGGCTCCCTG
--NNTGTGGTTT----
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RCTTTTTGGCTCCCTG
-GTCTGTGGTTT----
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---RCTTTTTGGCTCCCTG
NGANTTTTATGGCTCN---
 A C G T A C G T A C G T T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:RCTTTTTGGCTCCCTG
--------GCTCCG--
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RCTTTTTGGCTCCCTG
-NNHTGTGGTTWN---
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RCTTTTTGGCTCCCTG---
-----TTGGCATGGTGCCA
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RCTTTTTGGCTCCCTG
WCATTTTGKCCTCYT-
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:RCTTTTTGGCTCCCTG
-------NGCTN----
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RCTTTTTGGCTCCCTG-
--GTCATGCHTGRCTGS
 T C A G A G T C G A C T A G C T G C A T C A G T A C G T T C A G A C T G A G T C A C G T A T G C A G T C A T G C C G A T A T C G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C