Information for 14-GACACCCAGTGTC (Motif 17)

A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
Reverse Opposite:
C T A G G T C A A G T C C G T A A G T C C G A T A C T G A C T G C T A G A C G T A C T G C G A T A G T C
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 13.2bp
Average Position of motif in Background38.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GACACCCAGTGTC
ATAAATGACACCTATCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GACACCCAGTGTC
GGCCACACCCAN----
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GACACCCAGTGTC
GGCCACACCCA-----
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACACCCAGTGTC
GCCACACCCA-----
 A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GACACCCAGTGTC
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GACACCCAGTGTC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACACCCAGTGTC
TGACACCT------
 A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GACACCCAGTGTC
-----CCTTTGTT
 A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GACACCCAGTGTC-
----NCCATTGTTC
 A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACACCCAGTGTC----
-TGACCCAGTGACCTAC
 A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C