Information for 7-TGTAGTACAA (Motif 5)

A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T C T A G A C G T T G C A T A G C A C G T T C G A A G T C G T C A
p-value:1e-12
log p-value:-2.769e+01
Information Content per bp:1.754
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif255.0
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets56.1 +/- 24.5bp
Average Position of motif in Background52.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTAGTACAA----
CCGTATTATAAACAA
 A C G T A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGTAGTACAA---
---RNAACAATGG
 A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGTACAA-----
NCGTATTATAATCNTA
 A C G T A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGTACAA---
NTTNAGAACAATTA
 A C G T A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGTACAA-----
NNTNANAACAATTNNA
 A C G T A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTAGTACAA----------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGTAGTACAA--
------ACAAAG
 A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTAGTACAA---
---AAAACAATGG
 A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGTACAA-----
NANTATTATAATTNNN
 A C G T A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGTAGTACAA------
TTAAGAACAATAAATT
 A C G T C T A G A G C T C G T A A T C G A C G T C G T A A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T