Information for 6-TTGAGACACT (Motif 4)

A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
Reverse Opposite:
C G T A C T A G A C G T T C A G C G A T A G T C A C G T A G T C C G T A C T G A
p-value:1e-12
log p-value:-2.784e+01
Information Content per bp:1.848
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif59.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.0 +/- 28.9bp
Average Position of motif in Background45.2 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGACACT
NTTGATACATT
 A C G T A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGAGACACT
-TGAGTCA--
 A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGAGACACT
TTGCAACATN
 A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

FOSL1/MA0477.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGACACT
NATGAGTCACC
 A C G T A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGAGACACT-
ATGAGTCATCN
 A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T A C G T
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGAGACACT-
NTGAGTCATCN
 A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T A C G T
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGACACT
NATGAGTCACN
 A C G T A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGACACT
GATGAGTCAT-
 A C G T A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGAGACACT
NNVTGASTCATN
 A C G T A C G T A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGAGACACT----
ATGAGTCATNTNNT
 A G C T A C G T C T A G G T C A C T A G G C T A A G T C C G T A A G T C C G A T A C G T A C G T A C G T A C G T
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T