Information for 5-TGAAGTTYTT (Motif 2)

C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T
Reverse Opposite:
T G C A C G T A C T A G G C T A C G T A A T G C A C G T C G A T G T A C C G T A
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.682
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.52%
Number of Background Sequences with motif699.3
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets44.5 +/- 27.6bp
Average Position of motif in Background49.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTTYTT--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTTYTT----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGAAGTTYTT----
CTTTAAGTACTTAATG
 A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTTYTT----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGAAGTTYTT
TTAAGTGCTT
 C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Sox11/MA0869.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAGTTYTT
AACACTGAAATTGTT
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TGAAGTTYTT
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAGTTYTT-
AACACTGCAATTGTTC
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTTYTT--
NNATNAATTGTTTNN
 A C G T A C G T A C G T C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGAAGTTYTT
---AATAATT
 C G A T A C T G G C T A C G T A T A C G C G A T C G A T G A T C A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T