Information for 9-GAAGCCGCTTGCC (Motif 10)

T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C
Reverse Opposite:
C A T G T A C G T A G C T G C A C T G A T A C G A T G C C T A G A T C G A T G C G A C T A C G T A T G C
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.468
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 11.8bp
Average Position of motif in Background24.0 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCGCTTGCC
NGAAGC--------
 A C G T T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCGCTTGCC-
AGATGCTRCTRCCHT
 A C G T T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAGCCGCTTGCC--
-NNGTCGCGTGNCAC
 T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C A C G T A C G T
A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAAGCCGCTTGCC--
----NNACTTGCCTT
 T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCGCTTGCC
AGCAGCTGCT----
 A C G T T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAGCCGCTTGCC
CGCAGCTGCG----
 A C G T T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAAGCCGCTTGCC
AGCAGCTGCTNN--
 A C G T T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAAGCCGCTTGCC---
TAAGCCACTTGAAATT
 T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAAGCCGCTTGCC
AGGAAACAGCTG---
 A C G T A C G T T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAAGCCGCTTGCC-
--CGGCACGTGCCA
 T A C G T G C A C T G A T A C G T A G C G A T C T A C G A T G C G A C T A C G T A T C G A T G C G T A C A C G T
A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A