p-value: | 1e-11 |
log p-value: | -2.690e+01 |
Information Content per bp: | 1.937 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.0 +/- 22.5bp |
Average Position of motif in Background | 56.1 +/- 39.2bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAATGTTAAAAC AAGGTGTKAA--- |
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PB0109.1_Bbx_2/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAATGTTAAAAC---- TGATTGTTAACAGTTGG |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAAATGTTAAAAC-- TAAAGTCGTAAAACAT |
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Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAAATGTTAAAAC -AGGTGTTAAT-- |
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PB0013.1_Eomes_1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAAATGTTAAAAC- GAAAAGGTGTGAAAATT |
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TBX2/MA0688.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAATGTTAAAAC AAGGTGTGAAA-- |
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EOMES/MA0800.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAATGTTAAAAC AAGGTGTGAAAAT |
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PB0165.1_Sox11_2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAAATGTTAAAAC AAAATTGTTATGAA |
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TBR1/MA0802.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAAATGTTAAAAC -AGGTGTGAAA-- |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAAATGTTAAAAC-- TAAAGTCGTAAAATAG |
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