Information for 3-AGGAGAARCCCCTTTC (Motif 7)

C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
Reverse Opposite:
A C T G T G C A T G C A G C T A C A T G A C T G C T A G T C A G A G T C A C G T C G A T A G T C A G C T A G T C G A T C C G A T
p-value:1e-11
log p-value:-2.731e+01
Information Content per bp:1.655
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.1 +/- 24.7bp
Average Position of motif in Background36.0 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGAGAARCCCCTTTC
AGGGGAATCCCCT---
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGAGAARCCCCTTTC
AGGGGAATCCCCT---
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGAGAARCCCCTTTC
GGGGGAATCCCC----
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGAGAARCCCCTTTC--
ATGCCACGCCCCTTTTTG
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGAGAARCCCCTTTC
-GGGAAATCCCCN---
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGAGAARCCCCTTTC
-GGAAATCCCC-----
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGAGAARCCCCTTTC
-GGACACACCCCC---
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGAGAARCCCCTTTC
ANANGTGATACCCCATT-
 A C G T A C G T C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGAGAARCCCCTTTC
-GGAAATTCCC-----
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGAGAARCCCCTTTC-
AGGAGACCCCCAATTTG
 C G T A C T A G A C T G C T G A C T A G C G T A T G C A T C A G A G T C A G T C T A G C G T A C C G A T A C G T A C G T G T A C A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G