Information for 2-CTGACACTCGGCACAT (Motif 5)

A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
Reverse Opposite:
C G T A A C G T A T C G A C G T A T C G A G T C G T A C A T C G C G T A A C T G C G A T A C T G G C A T A G T C C G T A A C T G
p-value:1e-13
log p-value:-3.104e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 26.4bp
Average Position of motif in Background79.1 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGACACTCGGCACAT
VGCTGWCAVB--------
 A C G T A C G T A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGACACTCGGCACAT
---WDNCTGGGCA---
 A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGACACTCGGCACAT
GSCTGTCACTCA------
 A C G T A C G T A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGACACTCGGCACAT
NCTGTCAATCAN-----
 A C G T A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTGACACTCGGCACAT----
---TACATGTGCACATAAAA
 A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTGACACTCGGCACAT
TGTCTGDCACCT-------
 A C G T A C G T A C G T A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTGACACTCGGCACAT----
---CAGATGTGCACATACGT
 A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGACACTCGGCACAT
CAATCACTGGCAGAAT
 A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTGACACTCGGCACAT
SCTGTCAVTCAV-----
 A C G T A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CTGACACTCGGCACAT
AAGCACCTGTCAATAT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G C G T A A G T C C G T A A G T C A C G T A T G C A C T G A C T G A T G C C G T A A T G C C G T A A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T