Information for 5-GGCCACCCAGGAG (Motif 4)

C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C A G T C A C G T A C T G A C T G C T A G A C G T A C T G A C T G A G T C A G T C
p-value:1e-13
log p-value:-3.104e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 17.7bp
Average Position of motif in Background16.2 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACCCAGGAG
GGACCACCCACG--
 A C G T C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCCACCCAGGAG---
-GGCACCCAGGGGTGC
 C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G A C G T A C G T A C G T
A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCCACCCAGGAG--
-CCCCCCCGGGGGNN
 C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCCACCCAGGAG---
-NCCCCCCCGGGGGGN
 C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G A C G T A C G T A C G T
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCCACCCAGGAG---
-CCCCCCCGGGGGGGT
 C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G A C G T A C G T A C G T
A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCCACCCAGGAG
AGCCACTCAAG--
 C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCACCCAGGAG
GCGACCACCGAA---
 A C G T A C G T C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCCACCCAGGAG
GCGACCACACTG---
 A C G T A C G T C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCCACCCAGGAG
GCGACCACCGAA---
 A C G T A C G T C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCCACCCAGGAG
GGCGACCACCGA----
 A C G T A C G T A C G T C T A G A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A C T G A C T G C T G A A C T G
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T A C G T A C G T A C G T