Information for 5-ATCAAATTTACASTAM (Motif 11)

G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
Reverse Opposite:
A C T G A C G T T C G A A T G C C G A T A C T G A C G T C G T A C T G A C G T A G A C T A G C T A C G T A C T G C G T A A C G T
p-value:1e-10
log p-value:-2.370e+01
Information Content per bp:1.702
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif26.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.1 +/- 22.2bp
Average Position of motif in Background46.3 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATCAAATTTACASTAM
ATTAAA----------
 G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATTTACASTAM
AATGCAATAAAATTTAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATTTACASTAM
ACCCGTATCAAATTT-------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATCAAATTTACASTAM
CATTAATTATTCAT---
 A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATTTACASTAM
TAGGTAATAAAATTCA------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATCAAATTTACASTAM
CTCATTAATTATGCAT---
 A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T A C G T A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATCAAATTTACASTAM
CTCATTAATTATGCAT---
 A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATTTACASTAM
TCACCCATCAATAAACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATTTACASTAM
CTACCAATAAAATTCT------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ATCAAATTTACASTAM
ACGGCCATAAAATTAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T G T A C C G T A C T G A C T G A C G A T G A C T G A C T T C G A T G A C C G T A T A C G A G C T G T C A T G A C
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T