Information for 4-YACAGCGCCACCN (Motif 2)

G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T
Reverse Opposite:
T C G A A C T G C T A G A C G T A C T G A C T G A G T C A C T G A G T C A G C T A T C G A C G T C T A G
p-value:1e-60
log p-value:-1.394e+02
Information Content per bp:1.789
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.79%
Number of Background Sequences with motif117.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets53.1 +/- 18.7bp
Average Position of motif in Background45.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:YACAGCGCCACCN----
-NNGGCGACACCTCNNN
 G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:YACAGCGCCACCN
-AGCGCGCC----
 G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--YACAGCGCCACCN--
AGCTCGGCGCCAAAAGC
 A C G T A C G T G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YACAGCGCCACCN--
CCTTCGGCGCCAAAAGG
 A C G T A C G T G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------YACAGCGCCACCN
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------YACAGCGCCACCN
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------YACAGCGCCACCN
TCNCTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-YACAGCGCCACCN------
CNNBRGCGCCCCCTGSTGGC
 A C G T G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YACAGCGCCACCN
--CAGCC------
 G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YACAGCGCCACCN
CACAGN-------
 G A T C C G T A A T G C C T G A A C T G A G T C A C T G G T A C A G T C G T C A A G T C A G T C A G C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T