Information for 6-CCTGCATCAT (Motif 5)

A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T
Reverse Opposite:
G T C A C G A T A C T G C G T A C G A T A T C G A G T C C G T A C T A G A T C G
p-value:1e-12
log p-value:-2.938e+01
Information Content per bp:1.849
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif80.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets48.1 +/- 23.6bp
Average Position of motif in Background44.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCTGCATCAT
ATTGCATCAK
 A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCTGCATCAT
ATTGCATCAT
 A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

ATF4/MA0833.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCATCAT--
TATTGCATCATCC
 A C G T A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T A C G T A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCTGCATCAT-
-TTGCAACATN
 A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCATCAT-
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTGCATCAT
GYCATCMATCAT
 A C G T A C G T A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCATCAT---
TGCCTGCGYCMCCTT
 A C G T A C G T A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T A C G T A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTGCATCAT---
--TGAGTCATTTC
 A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGCATCAT-
TGTGACTCATT
 A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCATCAT
TACCCGCATN--
 A C G T A C G T A T G C G A T C C G A T A C T G A T G C C G T A A C G T G T A C C G T A A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T