Information for 9-GAGCACAGCT (Motif 8)

C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T
Reverse Opposite:
T G C A T A C G T G A C G C A T C A T G C A G T C T A G G T A C C G A T G A T C
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.582
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif400.4
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets41.8 +/- 26.0bp
Average Position of motif in Background48.3 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GAGCACAGCT
---CACAGN-
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GAGCACAGCT----
----HCAGCTGDTN
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAGCACAGCT-
-TGCCCAGNHW
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAGCACAGCT----
----GCAGCTGTNN
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAGCACAGCT
-----CAGCC
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAGCACAGCT----
----ACAGCTGTTV
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCACAGCT--
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGCACAGCT----
----NCAGCTGCTG
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGCACAGCT-----
GAGCACAGCAGGACA
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAGCACAGCT----
----ACAGCTGTTN
 C T A G G C T A C A T G G A T C G T C A G T A C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C