Information for 5-SBGCGACACV (Motif 5)

A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A
Reverse Opposite:
A C G T A T C G A G C T A C T G C G A T A G T C A C T G A T G C T A C G A T C G
p-value:1e-19
log p-value:-4.396e+01
Information Content per bp:1.710
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.56%
Number of Background Sequences with motif860.6
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets52.3 +/- 22.1bp
Average Position of motif in Background49.0 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-SBGCGACACV-----
NNGGCGACACCTCNNN
 A C G T A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----SBGCGACACV
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SBGCGACACV
-TACGTCAT-
 A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:SBGCGACACV
--ACGTCA--
 A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----SBGCGACACV---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----SBGCGACACV---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-SBGCGACACV
AGCGCGCC---
 A C G T A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:SBGCGACACV
--ACGTCATC
 A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A
A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----SBGCGACACV--
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:SBGCGACACV--
--GCCACACCCA
 A T G C A T G C A T C G A G T C C T A G C G T A A G T C C T G A A T G C T G C A A C G T A C G T
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A