Information for 16-GCGGAGCCTAGGA (Motif 22)

A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
Reverse Opposite:
A C G T A G T C A G T C A C G T G T C A T A C G C T A G G A T C A C G T G T A C A G T C C T A G A G T C
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 29.8bp
Average Position of motif in Background42.6 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCCTAGGA
-CGGAGC------
 A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCGGAGCCTAGGA
GGGGGCGGGGCC-----
 A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCCTAGGA
RGKGGGCGGAGC------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCCTAGGA
AGGGGGCGGGGCTG----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCGGAGCCTAGGA
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCGGAGCCTAGGA
GTGGGCCCCA---
 A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGAGCCTAGGA
NAGANTGGCGGGGNGNA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCGGAGCCTAGGA
GGGCGGGACC-----
 A C G T A C G T A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCGGAGCCTAGGA-------
----CTACTAGGATGTNNTN
 A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------GCGGAGCCTAGGA
GGGNGGGGGCGGGGC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G T G C A C T A G A G T C A T G C A C G T G T C A C T A G A C T G T G C A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T