Information for 21-YTATTMTTCYCTW (Motif 34)

G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T
Reverse Opposite:
C G T A C G T A A C T G C T A G A C T G C G T A C G T A A C G T C G T A C G T A C G A T C G T A C T A G
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 10.6bp
Average Position of motif in Background45.5 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0072.1_Sox5_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---YTATTMTTCYCTW
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----YTATTMTTCYCTW
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----YTATTMTTCYCTW
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---YTATTMTTCYCTW
AANTTATTGTTCTNNA
 A C G T A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---YTATTMTTCYCTW-
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--YTATTMTTCYCTW--
GANNATTAATCCCTNNN
 A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--YTATTMTTCYCTW--
GNNNATTAATCCCTNCN
 A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YTATTMTTCYCTW-
TAATTGTTCTAAAC
 G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---YTATTMTTCYCTW-
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------YTATTMTTCYCTW--
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G T C A C G T C G A T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T