Information for 17-TTAAAAACGTTTATRA (Motif 27)

A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
Reverse Opposite:
G A C T A G T C G T C A A C G T G C T A G T C A C G T A A G T C A T C G A C G T C G A T A C G T A C G T C A G T G T C A T C G A
p-value:1e-9
log p-value:-2.102e+01
Information Content per bp:1.665
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.5 +/- 18.1bp
Average Position of motif in Background51.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTAAAAACGTTTATRA
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTAAAAACGTTTATRA
--AAAAACCATTAAGG
 A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTAAAAACGTTTATRA
----AAACMATTAN--
 A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTAAAAACGTTTATRA
-----ANCGTTTANN-
 A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTAAAAACGTTTATRA-
-AAAAACCAATTAAGAA
 A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAAACGTTTATRA
NATTCAAAT---------
 A C G T A C G T A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTAAAAACGTTTATRA
ATTAAA-----------
 A C G T A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTAAAAACGTTTATRA
TTTGAAACCG-------
 A C G T A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTAAAAACGTTTATRA
NTTNAGAACAATTA---
 A C G T A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTAAAAACGTTTATRA
GTAAACA---------
 A C G T A C G T G C T A G T C A C G T A G C T A T G C A A T G C T C A G G A C T A C G T C G A T G T C A C A G T T C A G C T G A
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T