Information for 9-ACTTAMWCMTGGATTY (Motif 7)

C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
Reverse Opposite:
C T A G C G T A C G T A C G A T A G T C G T A C C T G A A C T G C A T G C G T A A C G T C G A T C G T A C G T A A C T G G C A T
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.717
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 35.1bp
Average Position of motif in Background62.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTAMWCMTGGATTY
ACCACTTAA----------
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTTAMWCMTGGATTY
ACCACTTAA----------
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAMWCMTGGATTY
CATAACCACTTAACAAC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTTAMWCMTGGATTY
GCACTTAA----------
 A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAMWCMTGGATTY
CTTAACCACTTAAGGAT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTTAMWCMTGGATTY
AAGCACTTAA----------
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAMWCMTGGATTY
CAATTAA----------
 A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAMWCMTGGATTY
NNAATTAGTCACGGT---
 A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACTTAMWCMTGGATTY
ACCACTTGAA---------
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------ACTTAMWCMTGGATTY
TAAGCCACTTAACATT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A T G C A G C A T G A T C G T A C A G C T C A T G C T A G C G T A C G A T A C G T G A T C
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T