Information for 18-TTAATGAAAAACTTTT (Motif 26)

C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
Reverse Opposite:
G T C A C G T A C G T A C G T A A C T G C G A T C G A T A C G T A C G T A C G T A G T C C T G A C A G T C G A T C G T A C G T A
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.707
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.8 +/- 29.1bp
Average Position of motif in Background48.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0100.1_Lmx1a/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTAATGAAAAACTTTT
CGAATTAATTAAAAACC---
 A C G T A C G T A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C A C G T A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTAATGAAAAACTTTT
NNAATTAATTAAAAANN---
 A C G T A C G T A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTAATGAAAAACTTTT
GGGTTTAATTAAAATTC---
 A C G T A C G T A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T A C G T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTAATGAAAAACTTTT
CGAATTAATTAATAATG---
 A C G T A C G T A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTAATGAAAAACTTTT
CGAATTAATTAAATACT---
 A C G T A C G T A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTAATGAAAAACTTTT
TAATTAATTAATAACTA--
 A C G T A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTAATGAAAAACTTTT-
---TTGACCTANTTATN
 C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTAATGAAAAACTTTT
GTTAAAAAAAAAAATTA-
 A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TTAATGAAAAACTTTT
GAAATTAATTAAATAAT---
 A C G T A C G T A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTAATGAAAAACTTTT
GTTCAAAAAAAAAATTC-
 A C G T A C G T C G A T G A C T C G T A G T C A A G C T T C A G C G T A T G C A T G C A C G T A C G T A T G A C G C A T A C G T G C A T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T