Information for 21-TGAATTGGTTGCA (Motif 25)

A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A C G T A A T G C A T G C C G T A G T C A A C G T A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 32.6bp
Average Position of motif in Background56.0 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0005.1_Barhl1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGAATTGGTTGCA
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGAATTGGTTGCA
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGAATTGGTTGCA
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

Hmx2/MA0897.1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTGGTTGCA
ATTCNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T

PH0042.1_Hmx2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTGGTTGCA
ATTCNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTGGTTGCA
ATTNNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTGGTTGCA
ATTNNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TGAATTGGTTGCA
NNNTATTGAATTGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T

PH0106.1_Msx1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGAATTGGTTGCA
NNATTAATTAGTNGNN
 A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A

Hmx1/MA0896.1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTGGTTGCA
ANNCATTAATTGCTNGN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C G T A T C G A T C G A C G T A C G T A C T G A G T C C G T A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T