Information for 17-GGCWGAGWKRAGKGKY (Motif 23)

A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
Reverse Opposite:
T C A G G T A C A G T C G T C A A G T C A C G T A G T C G T A C C G A T A G T C A C G T A G T C C G A T A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.825
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 32.6bp
Average Position of motif in Background34.4 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GGCWGAGWKRAGKGKY-
-------TTGAGTGSTT
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGCWGAGWKRAGKGKY
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGCWGAGWKRAGKGKY
------CTYRAGTGSY
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GGCWGAGWKRAGKGKY
------BTBRAGTGSN
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGCWGAGWKRAGKGKY
--NNGAGATAAGA---
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GGCWGAGWKRAGKGKY-
-------TTRAGTGSYK
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCWGAGWKRAGKGKY
---ANAGATAAGAA--
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGCWGAGWKRAGKGKY
----CAGATAAGGN--
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGCWGAGWKRAGKGKY
----NAGATAAGNN--
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C
A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGCWGAGWKRAGKGKY-
------CTTGAGTGGCT
 A C T G A C T G A G T C G C T A A C T G C G T A A C T G C G T A A C T G C T A G C G T A A C T G C A G T A C T G C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T