Information for 6-CCACGCGAGC (Motif 16)

A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A T G C A C T G A G T C C T A G A G C T A C T G A C T G
p-value:1e-9
log p-value:-2.111e+01
Information Content per bp:1.858
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.2 +/- 20.2bp
Average Position of motif in Background41.0 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCACGCGAGC
GGCACGCGTC-
 A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCACGCGAGC
-CACGCA---
 A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCACGCGAGC
NCCACGTG---
 A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCACGCGAGC
GCCACGTG---
 A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCACGCGAGC---
TCCCAGMCRAGCCCC
 A C G T A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCACGCGAGC
GGCACGTGCC-
 A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCACGCGAGC
KCCACGTGAC-
 A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCACGCGAGC-
GTGCCACGCGACTG
 A C G T A C G T A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCACGCGAGC
TCACGTGACC
 A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCACGCGAGC-
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G T C C T A G G T A C A T C G T C G A A C T G A T G C A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G