Information for 13-TCAGAAACTSGAGGGC (Motif 14)

C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C
Reverse Opposite:
C T A G T A G C T A G C A T G C C G A T T A G C A T G C C G T A T A C G A C G T C A G T C G A T A G T C G C A T A C T G C G T A
p-value:1e-10
log p-value:-2.335e+01
Information Content per bp:1.707
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 27.1bp
Average Position of motif in Background37.7 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAAACTSGAGGGC
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCAGAAACTSGAGGGC
---GWAAYHTGAKMC-
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TCAGAAACTSGAGGGC
AAGATCGGAANTNNNA----
 A C G T A C G T A C G T A C G T C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCAGAAACTSGAGGGC
ACTGAAACCA------
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TCAGAAACTSGAGGGC-
-------BTBRAGTGSN
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:TCAGAAACTSGAGGGC-
-------CTYRAGTGSY
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:TCAGAAACTSGAGGGC
---GWAAYHTGABMC-
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.46
Offset:1
Orientation:forward strand
Alignment:TCAGAAACTSGAGGGC-
-GGGTTACTANAGGTCA
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C A C G T
A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.46
Offset:9
Orientation:reverse strand
Alignment:TCAGAAACTSGAGGGC-
---------CTAGGCCT
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.46
Offset:8
Orientation:reverse strand
Alignment:TCAGAAACTSGAGGGC--
--------TTGAGTGSTT
 C G A T G T A C C G T A A C T G C G T A G T C A G T C A A G T C C G A T T A C G A C T G C G T A A T C G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T