Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-91 | -2.105e+02 | 0.0000 | 147.0 | 17.88% | 875.7 | 1.93% | motif file (matrix) |
svg |
2 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-75 | -1.730e+02 | 0.0000 | 167.0 | 20.32% | 1568.3 | 3.46% | motif file (matrix) |
svg |
3 |
| E-box(bHLH)/Promoter/Homer | 1e-69 | -1.611e+02 | 0.0000 | 92.0 | 11.19% | 379.9 | 0.84% | motif file (matrix) |
svg |
4 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-68 | -1.575e+02 | 0.0000 | 141.0 | 17.15% | 1192.2 | 2.63% | motif file (matrix) |
svg |
5 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-66 | -1.538e+02 | 0.0000 | 169.0 | 20.56% | 1843.5 | 4.07% | motif file (matrix) |
svg |
6 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-62 | -1.445e+02 | 0.0000 | 76.0 | 9.25% | 266.6 | 0.59% | motif file (matrix) |
svg |
7 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-50 | -1.164e+02 | 0.0000 | 159.0 | 19.34% | 2147.5 | 4.74% | motif file (matrix) |
svg |
8 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-50 | -1.156e+02 | 0.0000 | 164.0 | 19.95% | 2296.0 | 5.07% | motif file (matrix) |
svg |
9 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-49 | -1.134e+02 | 0.0000 | 158.0 | 19.22% | 2171.8 | 4.80% | motif file (matrix) |
svg |
10 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-44 | -1.025e+02 | 0.0000 | 140.0 | 17.03% | 1876.9 | 4.14% | motif file (matrix) |
svg |
11 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-39 | -9.032e+01 | 0.0000 | 166.0 | 20.19% | 2872.6 | 6.34% | motif file (matrix) |
svg |
12 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-36 | -8.498e+01 | 0.0000 | 199.0 | 24.21% | 4107.0 | 9.07% | motif file (matrix) |
svg |
13 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-36 | -8.414e+01 | 0.0000 | 208.0 | 25.30% | 4451.3 | 9.83% | motif file (matrix) |
svg |
14 |
| CRE(bZIP)/Promoter/Homer | 1e-32 | -7.431e+01 | 0.0000 | 85.0 | 10.34% | 941.2 | 2.08% | motif file (matrix) |
svg |
15 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-22 | -5.237e+01 | 0.0000 | 45.0 | 5.47% | 356.8 | 0.79% | motif file (matrix) |
svg |
16 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-22 | -5.119e+01 | 0.0000 | 51.0 | 6.20% | 485.2 | 1.07% | motif file (matrix) |
svg |
17 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-21 | -5.027e+01 | 0.0000 | 63.0 | 7.66% | 767.5 | 1.69% | motif file (matrix) |
svg |
18 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-21 | -4.936e+01 | 0.0000 | 67.0 | 8.15% | 881.7 | 1.95% | motif file (matrix) |
svg |
19 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-20 | -4.832e+01 | 0.0000 | 62.0 | 7.54% | 773.8 | 1.71% | motif file (matrix) |
svg |
20 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-20 | -4.807e+01 | 0.0000 | 67.0 | 8.15% | 903.1 | 1.99% | motif file (matrix) |
svg |
21 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-20 | -4.721e+01 | 0.0000 | 58.0 | 7.06% | 694.0 | 1.53% | motif file (matrix) |
svg |
22 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-19 | -4.492e+01 | 0.0000 | 71.0 | 8.64% | 1069.3 | 2.36% | motif file (matrix) |
svg |
23 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-18 | -4.253e+01 | 0.0000 | 96.0 | 11.68% | 1884.3 | 4.16% | motif file (matrix) |
svg |
24 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-17 | -3.971e+01 | 0.0000 | 95.0 | 11.56% | 1935.3 | 4.27% | motif file (matrix) |
svg |
25 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-16 | -3.765e+01 | 0.0000 | 85.0 | 10.34% | 1668.6 | 3.68% | motif file (matrix) |
svg |
26 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-16 | -3.708e+01 | 0.0000 | 35.0 | 4.26% | 316.6 | 0.70% | motif file (matrix) |
svg |
27 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.642e+01 | 0.0000 | 80.0 | 9.73% | 1542.3 | 3.41% | motif file (matrix) |
svg |
28 |
| NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-15 | -3.549e+01 | 0.0000 | 63.0 | 7.66% | 1044.0 | 2.31% | motif file (matrix) |
svg |
29 |
| ETS(ETS)/Promoter/Homer | 1e-14 | -3.447e+01 | 0.0000 | 60.0 | 7.30% | 980.7 | 2.17% | motif file (matrix) |
svg |
30 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-13 | -3.184e+01 | 0.0000 | 61.0 | 7.42% | 1072.5 | 2.37% | motif file (matrix) |
svg |
31 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-13 | -3.162e+01 | 0.0000 | 30.0 | 3.65% | 275.9 | 0.61% | motif file (matrix) |
svg |
32 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-13 | -3.096e+01 | 0.0000 | 46.0 | 5.60% | 663.9 | 1.47% | motif file (matrix) |
svg |
33 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-11 | -2.747e+01 | 0.0000 | 89.0 | 10.83% | 2156.7 | 4.76% | motif file (matrix) |
svg |
34 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-11 | -2.708e+01 | 0.0000 | 110.0 | 13.38% | 2969.5 | 6.56% | motif file (matrix) |
svg |
35 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-11 | -2.702e+01 | 0.0000 | 47.0 | 5.72% | 773.9 | 1.71% | motif file (matrix) |
svg |
36 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.402e+01 | 0.0000 | 67.0 | 8.15% | 1502.4 | 3.32% | motif file (matrix) |
svg |
37 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-9 | -2.211e+01 | 0.0000 | 89.0 | 10.83% | 2395.1 | 5.29% | motif file (matrix) |
svg |
38 |
| NRF(NRF)/Promoter/Homer | 1e-9 | -2.162e+01 | 0.0000 | 55.0 | 6.69% | 1174.6 | 2.59% | motif file (matrix) |
svg |
39 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.053e+01 | 0.0000 | 37.0 | 4.50% | 633.0 | 1.40% | motif file (matrix) |
svg |
40 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-8 | -2.030e+01 | 0.0000 | 108.0 | 13.14% | 3256.6 | 7.19% | motif file (matrix) |
svg |
41 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-8 | -1.855e+01 | 0.0000 | 23.0 | 2.80% | 291.0 | 0.64% | motif file (matrix) |
svg |
42 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-7 | -1.807e+01 | 0.0000 | 109.0 | 13.26% | 3440.7 | 7.60% | motif file (matrix) |
svg |
43 |
| Sp1(Zf)/Promoter/Homer | 1e-7 | -1.650e+01 | 0.0000 | 59.0 | 7.18% | 1516.4 | 3.35% | motif file (matrix) |
svg |
44 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-7 | -1.620e+01 | 0.0000 | 24.0 | 2.92% | 359.1 | 0.79% | motif file (matrix) |
svg |
45 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-6 | -1.610e+01 | 0.0000 | 68.0 | 8.27% | 1880.1 | 4.15% | motif file (matrix) |
svg |
46 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-6 | -1.601e+01 | 0.0000 | 15.0 | 1.82% | 144.1 | 0.32% | motif file (matrix) |
svg |
47 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-6 | -1.597e+01 | 0.0000 | 20.0 | 2.43% | 259.2 | 0.57% | motif file (matrix) |
svg |
48 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-6 | -1.579e+01 | 0.0000 | 80.0 | 9.73% | 2377.5 | 5.25% | motif file (matrix) |
svg |
49 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.558e+01 | 0.0000 | 51.0 | 6.20% | 1260.4 | 2.78% | motif file (matrix) |
svg |
50 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.553e+01 | 0.0000 | 11.0 | 1.34% | 75.0 | 0.17% | motif file (matrix) |
svg |
51 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-6 | -1.544e+01 | 0.0000 | 36.0 | 4.38% | 743.0 | 1.64% | motif file (matrix) |
svg |
52 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-6 | -1.541e+01 | 0.0000 | 42.0 | 5.11% | 946.6 | 2.09% | motif file (matrix) |
svg |
53 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-6 | -1.538e+01 | 0.0000 | 116.0 | 14.11% | 3937.1 | 8.69% | motif file (matrix) |
svg |
54 |
| GFY(?)/Promoter/Homer | 1e-6 | -1.510e+01 | 0.0000 | 16.0 | 1.95% | 177.2 | 0.39% | motif file (matrix) |
svg |
55 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.444e+01 | 0.0000 | 34.0 | 4.14% | 708.7 | 1.57% | motif file (matrix) |
svg |
56 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-6 | -1.444e+01 | 0.0000 | 46.0 | 5.60% | 1126.5 | 2.49% | motif file (matrix) |
svg |
57 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-6 | -1.412e+01 | 0.0000 | 17.0 | 2.07% | 215.9 | 0.48% | motif file (matrix) |
svg |
58 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.400e+01 | 0.0000 | 32.0 | 3.89% | 656.9 | 1.45% | motif file (matrix) |
svg |
59 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.313e+01 | 0.0000 | 59.0 | 7.18% | 1685.2 | 3.72% | motif file (matrix) |
svg |
60 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-5 | -1.274e+01 | 0.0000 | 21.0 | 2.55% | 349.8 | 0.77% | motif file (matrix) |
svg |
61 |
| NFY(CCAAT)/Promoter/Homer | 1e-5 | -1.273e+01 | 0.0000 | 60.0 | 7.30% | 1747.3 | 3.86% | motif file (matrix) |
svg |
62 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-5 | -1.262e+01 | 0.0000 | 15.0 | 1.82% | 191.0 | 0.42% | motif file (matrix) |
svg |
63 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.215e+01 | 0.0000 | 38.0 | 4.62% | 931.5 | 2.06% | motif file (matrix) |
svg |
64 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.158e+01 | 0.0001 | 16.0 | 1.95% | 234.6 | 0.52% | motif file (matrix) |
svg |
65 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-4 | -1.058e+01 | 0.0001 | 113.0 | 13.75% | 4227.3 | 9.33% | motif file (matrix) |
svg |
66 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.029e+01 | 0.0002 | 55.0 | 6.69% | 1692.3 | 3.74% | motif file (matrix) |
svg |
67 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.022e+01 | 0.0002 | 128.0 | 15.57% | 4967.4 | 10.97% | motif file (matrix) |
svg |
68 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-4 | -9.651e+00 | 0.0003 | 7.0 | 0.85% | 53.1 | 0.12% | motif file (matrix) |
svg |
69 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-4 | -9.541e+00 | 0.0004 | 45.0 | 5.47% | 1330.8 | 2.94% | motif file (matrix) |
svg |
70 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-4 | -9.481e+00 | 0.0004 | 46.0 | 5.60% | 1374.9 | 3.04% | motif file (matrix) |
svg |
71 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -9.208e+00 | 0.0005 | 45.0 | 5.47% | 1350.4 | 2.98% | motif file (matrix) |
svg |
72 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -8.882e+00 | 0.0007 | 17.0 | 2.07% | 326.3 | 0.72% | motif file (matrix) |
svg |
73 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.733e+00 | 0.0008 | 159.0 | 19.34% | 6648.3 | 14.68% | motif file (matrix) |
svg |
74 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.895e+00 | 0.0018 | 18.0 | 2.19% | 389.1 | 0.86% | motif file (matrix) |
svg |
75 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.740e+00 | 0.0021 | 6.0 | 0.73% | 52.5 | 0.12% | motif file (matrix) |
svg |
76 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -7.303e+00 | 0.0032 | 159.0 | 19.34% | 6860.9 | 15.15% | motif file (matrix) |
svg |
77 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -7.046e+00 | 0.0041 | 51.0 | 6.20% | 1757.6 | 3.88% | motif file (matrix) |
svg |
78 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.587e+00 | 0.0064 | 10.0 | 1.22% | 171.9 | 0.38% | motif file (matrix) |
svg |
79 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.196e+00 | 0.0094 | 99.0 | 12.04% | 4076.0 | 9.00% | motif file (matrix) |
svg |
80 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.000e+00 | 0.0113 | 27.0 | 3.28% | 814.5 | 1.80% | motif file (matrix) |
svg |
81 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -5.963e+00 | 0.0116 | 12.0 | 1.46% | 251.9 | 0.56% | motif file (matrix) |
svg |
82 |
| Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer | 1e-2 | -5.890e+00 | 0.0123 | 18.0 | 2.19% | 467.7 | 1.03% | motif file (matrix) |
svg |
83 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.820e+00 | 0.0130 | 50.0 | 6.08% | 1821.8 | 4.02% | motif file (matrix) |
svg |
84 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.780e+00 | 0.0134 | 119.0 | 14.48% | 5115.1 | 11.30% | motif file (matrix) |
svg |
85 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -5.085e+00 | 0.0265 | 18.0 | 2.19% | 506.1 | 1.12% | motif file (matrix) |
svg |
86 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -5.061e+00 | 0.0268 | 8.0 | 0.97% | 148.7 | 0.33% | motif file (matrix) |
svg |
87 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.964e+00 | 0.0292 | 19.0 | 2.31% | 552.2 | 1.22% | motif file (matrix) |
svg |
88 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -4.794e+00 | 0.0342 | 13.0 | 1.58% | 329.7 | 0.73% | motif file (matrix) |
svg |
89 |
| ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.691e+00 | 0.0375 | 9.0 | 1.09% | 191.8 | 0.42% | motif file (matrix) |
svg |
90 |
| PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer | 1e-2 | -4.671e+00 | 0.0379 | 7.0 | 0.85% | 128.0 | 0.28% | motif file (matrix) |
svg |