Information for 20-TTTTGTCCTG (Motif 27)

A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.7 +/- 28.9bp
Average Position of motif in Background54.0 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTTTGTCCTG-
---TGACCTYA
 A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGTCCTG--
WCATTTTGKCCTCYT
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGTCCTG---
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTCCTG
CCTTTGTTTT-
 A C G T A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTTTGTCCTG
---TGACCT-
 A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTCCTG--
TTTTTTTTCNNGTN
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTTGTCCTG
--GTGACCTT
 A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTCCTG
CCATTGTTTT-
 A C G T A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTTTGTCCTG
TTGACCTTTTGACCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTGTCCTG-
TGACCTTTTGACCTTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T