Information for 13-CCTTRAGGAAGGT (Motif 20)

A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C A C G T A C G T A T G C A G T C A C G T A G T C G T C A C T G A A C T G A C T G
p-value:1e-9
log p-value:-2.107e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 27.0bp
Average Position of motif in Background48.8 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B/MA0811.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTTRAGGAAGGT
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTTRAGGAAGGT
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTTRAGGAAGGT
TTGCCCTAGGGCAT--
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTTRAGGAAGGT
TGCCCNGGGGCA---
 A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTTRAGGAAGGT
TGACCTTGAN------
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTTRAGGAAGGT
TGACCTTGAV------
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCTTRAGGAAGGT
ATTCCCTGAGGGGAA--
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCTTRAGGAAGGT
ATGCCCTGAGGC----
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCTTRAGGAAGGT--
----AAGGCAAGTGT
 A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTTRAGGAAGGT
SCCTSAGGSCAW--
 A C G T A G T C A G T C A G C T A C G T T C A G C G T A A C T G A T C G T C G A G T C A A C T G A C T G A G C T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T