Information for 14-CTAGTTTCCATST (Motif 21)

A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
Reverse Opposite:
C G T A A T C G C T G A A C G T A C T G T A C G C T G A C T G A C G T A A G T C A C G T C G T A A C T G
p-value:1e-7
log p-value:-1.761e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.5 +/- 16.1bp
Average Position of motif in Background43.1 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU1F1/MA0784.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAGTTTCCATST-
CTAATTTGCATATT
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTAGTTTCCATST
--ATTTTCCATT-
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAGTTTCCATST
BTVATTWGCATA-
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAGTTTCCATST
CTCATTTGCATW-
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTAGTTTCCATST
--ATTTTCCATT-
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTAGTTTCCATST
TTCATTTGCATAT
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTAGTTTCCATST
-TAATTTGCATAA
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTAGTTTCCATST
-TAATTTGCATAA
 A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTAGTTTCCATST
GAAAACTAGTTAACATC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTTTCCATST--
TNTAATTTGCATANNN
 A C G T A G T C A C G T C G T A T A C G A C G T A G C T A G C T A G T C G T A C C G T A A G C T A T G C C G A T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A