Information for 3-VTGGCCACATTBTHTC (Motif 11)

T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
Reverse Opposite:
A T C G T G C A C G T A T C G A T A G C T C G A G T C A A C G T A C T G G A C T A T C G A C T G A G T C G T A C C G T A A T C G
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.755
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 31.1bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:VTGGCCACATTBTHTC
---ACCACATCCTGT-
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:VTGGCCACATTBTHTC
NWAACCACADNN----
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:VTGGCCACATTBTHTC
-TWGHWACAWTGTWDC
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:VTGGCCACATTBTHTC
-TTGCAACATN-----
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:VTGGCCACATTBTHTC
-YDGHTACAWTGTADC
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-VTGGCCACATTBTHTC
NATGACATCATCNNN--
 A C G T T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:VTGGCCACATTBTHTC
ATGACATCATCNN---
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:VTGGCCACATTBTHTC
NAAACCACAG------
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:VTGGCCACATTBTHTC
-AAACCACAGC-----
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:VTGGCCACATTBTHTC
-AAACCACAGAN----
 T A G C A C G T A C T G C T A G A G T C T A G C C G T A G T A C G T C A A C G T A G C T A T C G A G C T G A C T A C G T A T G C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T