Information for 6-CTTGCCCTTCTGA (Motif 10)

A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C G T C A A T C G C T G A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 27.1bp
Average Position of motif in Background42.6 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA/MA0729.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCCCTTCTGA----
CATTGACCTTTTGACCTC
 A C G T A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A A C G T A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCCCTTCTGA
NNACTTGCCTT-----
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTGCCCTTCTGA
BNTGDCCTTG---
 A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTGCCCTTCTGA----
-TTGACCTTTTGACCTT
 A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTTGCCCTTCTGA
-ATGACCTTGA--
 A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTTGCCCTTCTGA
TGACCTTGACCT-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTGCCCTTCTGA
-CTGCCCGCA---
 A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTTGCCCTTCTGA
-GTGACCTT----
 A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTGCCCTTCTGA
-NTGACCTTGA--
 A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTGCCCTTCTGA-----
--TGACCTTTTGACCTTT
 A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T