Information for 7-AGCAAAGTTT (Motif 9)

G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T
Reverse Opposite:
T G C A C T G A T C G A G T A C A C G T G C A T A C G T A C T G T A G C C G A T
p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.685
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.55%
Number of Background Sequences with motif1160.4
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets52.5 +/- 29.8bp
Average Position of motif in Background48.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGCAAAGTTT-----
TCGCGAAGGTTGTACT
 A C G T G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGCAAAGTTT-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGCAAAGTTT-
----AAGCTTG
 G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCAAAGTTT-
-GCAGTGATTT
 G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAAGTTT-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCAAAGTTT
ACATCAAAGG--
 A C G T A C G T G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCAAAGTTT
NNATAAGGNN
 G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGTTT--
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGCAAAGTTT
AAAGATCAAAGG--
 A C G T A C G T A C G T A C G T G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGTTT--
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G G T A C T G C A C G T A G T C A C A T G A G C T G A C T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T