Information for 6-GTGAGGGCCAGCNGGG (Motif 7)

A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C G T A C A G T C A C T G A C T G A G T C A C G T A C T G A C T G A T G C A G T C A G T C A C G T A G T C G T C A A T G C
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 26.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG----
-----DCHCAGCAGGRGGCC
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGAGGGCCAGCNGGG
--GAGSCCGAGC----
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG
-TGAGTGACAGSC---
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GTGAGGGCCAGCNGGG--
------CACAGCAGGGGG
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG
NTGATTGACAGN----
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG-
-------HCAGCTGDTN
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG
BTGABTGACAGS----
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG
---NGNGACAGCTGCN
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G
A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG-
-------CCAGCTGTTN
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTGAGGGCCAGCNGGG
-----NNVCAGCTGB-
 A T C G A C G T A C T G C G T A A C T G C T A G A T C G G T A C A G T C C G T A A C T G A G T C A G T C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T