Information for 4-GGAGCACTCACTT (Motif 3)

C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T
Reverse Opposite:
C T G A C G T A A T C G A C G T C A T G G C T A T A C G A G C T A C T G A G T C C G A T A T G C A G T C
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.768
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif24.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.2 +/- 26.1bp
Average Position of motif in Background56.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCACTCACTT
GGGAGGACNG----
 A C G T C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGAGCACTCACTT
-AAGCACTTAA--
 C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAGCACTCACTT
GGACCACCCACG-
 C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAGCACTCACTT
RGGGCACTAACY-
 C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAGCACTCACTT--
AGCGGCACACACGCAA
 A C G T C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGAGCACTCACTT--
-----MRSCACTYAA
 C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGAGCACTCACTT---
-------CCACTTGAA
 C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGAGCACTCACTT---
------ACCACTTGAA
 C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCACTCACTT
CGGAGC--------
 A C G T C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCACTCACTT
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T C T A G A T C G C G T A T A C G T A G C C T G A A T G C C A G T G A T C C G T A A T G C A C G T A G C T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G