Information for 4-AGCGCCCYCTGGGAGG (Motif 2)

T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G
Reverse Opposite:
G T A C A G T C C A G T A G T C T A G C A G T C C T G A A C T G C T A G C T A G A T C G A C T G A T G C A T C G G T A C A C G T
p-value:1e-12
log p-value:-2.987e+01
Information Content per bp:1.695
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif26.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.8 +/- 18.1bp
Average Position of motif in Background53.6 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCCYCTGGGAGG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCCYCTGGGAGG--
TAGCGCCCCCTGGTGGCCA
 A C G T T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCGCCCYCTGGGAGG-
--CCCCCCCGGGGGGGT
 T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCGCCCYCTGGGAGG-
--ACCCCCCCGGGGGGN
 T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G A C G T
A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCGCCCYCTGGGAGG
-TCNCCTGCTGNGNNN
 T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCGCCCYCTGGGAGG
--CACCCCCGGGGGGG
 T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCGCCCYCTGGGAGG
-TNTCCTGCTGTGNNG
 T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCCYCTGGGAGG--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCGCCCYCTGGGAGG-
--RGSMTBCTGGGAAAT
 T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCCYCTGGGAGG
GACCCCCCGCTGCGC--
 A C G T T G C A A C T G A T G C A T C G G T A C A T G C G A T C A G T C A G T C A G C T T C A G A C T G T C A G G C T A T C A G A C T G
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T