Information for 6-TTTAAAAATC (Motif 9)

G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C
Reverse Opposite:
A C T G G C T A C G A T C G A T C G A T A C G T A C G T T G C A T G C A C G T A
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.654
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.27%
Number of Background Sequences with motif1421.8
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets55.3 +/- 30.6bp
Average Position of motif in Background49.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAAATC
NATTCAAAT---
 A C G T A C G T G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTAAAAATC
TTTGAAACCG
 G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTAAAAATC
--NAACAAT-
 G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTTAAAAATC------
--AAAAAATCAATAAT
 G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTAAAAATC------
--AAAAAATCGATAAT
 G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTAAAAATC---
ATGCTAAAAATAGAA
 A C G T A C G T G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTAAAAATC
GTAAACAAT-
 G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAAATC--
TCTTTANTAATANN
 A C G T A C G T G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTAAAAATC
ATTAAA----
 G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTAAAAATC------
--AAAAAATCGATAAT
 G C A T A C G T A C G T T G C A G T C A G C T A G C T A G C T A C G A T T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T