Information for 5-GAGGCAGCAACCT (Motif 5)

A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C G T A T C G A G T C A C G T A C T G A G T C A G T C A G C T A G T C
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.933
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 26.5bp
Average Position of motif in Background41.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCAGCAACCT
TGAGTCAGCA----
 A C G T A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGGCAGCAACCT--
AAGTCAGCANTTTTN
 A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGGCAGCAACCT
CTGAGTCAGCAATTT
 A C G T A C G T A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGGCAGCAACCT-
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

MAFF/MA0495.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGGCAGCAACCT--
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCAGCAACCT
TGACTCAGCA----
 A C G T A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGCAGCAACCT--
ADGGYAGYAGCATCT
 A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGCAGCAACCT
CWGGCGGGAA---
 A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGGCAGCAACCT
-NGTCAGCANTTT
 A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGGCAGCAACCT
ATGACTCAGCANWWT
 A C G T A C G T A C T G C T G A A C T G A C T G A G T C C G T A A C T G A T G C C G T A G T C A G T A C A G T C A C G T
T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T