Information for 4-GCTGCTTCTCCAC (Motif 5)

A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
Reverse Opposite:
T A C G A C G T C T A G A C T G G T C A A C T G C G T A C G T A A C T G A G T C C G T A A C T G A T G C
p-value:1e-14
log p-value:-3.432e+01
Information Content per bp:1.888
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.5 +/- 22.2bp
Average Position of motif in Background43.1 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCTGCTTCTCCAC
---GCTTCC----
 A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCTTCTCCAC
TGCCTGCGYCMCCTT
 A C G T A C G T A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTGCTTCTCCAC
GCTGTTACCCT--
 A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCTTCTCCAC
CAGCTGTTTCCT---
 A C G T A C G T A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTTCTCCAC
AGCAGCTGCT-------
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTTCTCCAC
AGCAGCTGCTNN-----
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GCTGCTTCTCCAC
-------ATCCAC
 A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCTGCTTCTCCAC
-----TTTTCCA-
 A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTTCTCCAC
TGCAGCTGTCCCT----
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:10
Score:0.51
Offset:-12
Orientation:forward strand
Alignment:------------GCTGCTTCTCCAC
ACTYKNATTCGTGNTACTTC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C G T A G T C G A T C C G T A A T G C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T A C G T A C G T A C G T A C G T