Information for 11-GATAGTCTCC (Motif 26)

A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A A C G T A G T C
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.964
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 23.1bp
Average Position of motif in Background60.6 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GATAGTCTCC--
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATAGTCTCC----
AGGCTAATCCCCAANG
 A C G T A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0121.1_Obox1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GATAGTCTCC----
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATAGTCTCC----
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATAGTCTCC----
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GATAGTCTCC---
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0125.1_Gata3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GATAGTCTCC-----
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GATAGTCTCC
--TWGTCTGV
 A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GATAGTCTCC------
TACGAGACTCCTCTAAC
 A C G T A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GATAGTCTCC
-YTAATCCY-
 A C T G C G T A A C G T C G T A C T A G A C G T A G T C A C G T A G T C A G T C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T