Information for 13-CCCTGGGGGAAAS (Motif 21)

A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
Reverse Opposite:
A T C G A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.888
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.6 +/- 27.8bp
Average Position of motif in Background36.0 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGGAAAS
ATTCCCTGAGGGGAA-
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGGAAAS
ATTGCCTGAGGCGAA-
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCCTGGGGGAAAS
SCCTSAGGSCAW-
 A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGGAAAS
GTCCCCAGGGGA----
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGGGGAAAS
TGCCCTGAGGGCA--
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGGGGAAAS
TGCCCTGAGGGCA--
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGGAAAS
ATGCCCTGAGGC----
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGGGGAAAS
TGCCCTNAGGGCA--
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGGAAAS
NTGCCCTAGGGCAA--
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGGGGAAAS
ACCCCCCCGGGGGGN--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G T A C G A C T G A C T G A C T G G T C A G T C A C G T A A T C G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T