Information for 9-GAGGCTGGGCGGAGCT (Motif 18)

A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C G A C T A T G C A G T C A T C G T A G C A G T C A G T C G C T A A C T G G T A C A T G C A G C T A G T C
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 13.4bp
Average Position of motif in Background31.1 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GAGGCTGGGCGGAGCT
---RGKGGGCGGAGC-
 A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCTGGGCGGAGCT
GGGGGCGGGGCC-----
 A C G T A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:GAGGCTGGGCGGAGCT
---------CGGAGC-
 A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGGCTGGGCGGAGCT-
--NNVDGGGYGGGGCYN
 A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T A C G T
A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGGCTGGGCGGAGCT-
---AGGGGGCGGGGCTG
 A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T A C G T
A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGCTGGGCGGAGCT
GGGNGGGGGCGGGGC------
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCTGGGCGGAGCT
GGGGGCGGGGC------
 A C G T A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGGCTGGGCGGAGCT
----MKGGGYGTGGCC
 A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
A C G T A C G T A C G T A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GAGGCTGGGCGGAGCT
-----GGGGNGGGGC-
 A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAGGCTGGGCGGAGCT
NAGANTGGCGGGGNGNA---
 A C G T A C G T A C G T A C G T A C T G C T G A A T C G A C T G A G T C C G A T C T A G A C T G A T C G T A G C A C T G A T C G C G T A C T A G A G T C A G C T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T A C G T