Information for 18-TGGATTCTATGTG (Motif 34)

A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A C G A T C G T A C T A G C G T A G T C A A C G T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 15.5bp
Average Position of motif in Background51.1 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGATTCTATGTG
AGGVNCCTTTGT-
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGGATTCTATGTG-
----TTTTATKRGG
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGATTCTATGTG
TGTGGATTNNN----
 A C G T A C G T A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGATTCTATGTG-----
--ANTCCTTTGTCTNNNN
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGGATTCTATGTG
NNTGTGGATTSS-----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGGATTCTATGTG-----
--NNNNTTGTGTGCTTNN
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGATTCTATGTG---
NNANTTTTATTGGNNN
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGGATTCTATGTG-
----TTTTATTRGN
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGGATTCTATGTG
---NTTTTATTGG
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGATTCTATGTG---
NNAATTTTATTGGNTN
 A C G T A C T G C T A G G T C A A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T