Information for 15-ADTTCAAATAGTACTG (Motif 22)

C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
Reverse Opposite:
A T G C C G T A C T A G A C G T C G T A A T G C A C G T G T C A A C G T A C G T A C G T C T A G G T C A C G T A G C T A A G C T
p-value:1e-11
log p-value:-2.591e+01
Information Content per bp:1.814
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 28.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ADTTCAAATAGTACTG
NATTCAAAT-------
 C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ADTTCAAATAGTACTG
CGGTTTCAAA--------
 A C G T A C G T C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ADTTCAAATAGTACTG
TTATGCAAAT-------
 A C G T C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ADTTCAAATAGTACTG
ATATGCAAAT-------
 A C G T C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ADTTCAAATAGTACTG
-CCAAAAATAG-----
 C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ADTTCAAATAGTACTG
NNTNNCAATATTAG--
 C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ADTTCAAATAGTACTG
NNTNNCAATATTAG--
 C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ADTTCAAATAGTACTG
TATGCAAAT-------
 C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ADTTCAAATAGTACTG
ATATGCAAATNNN----
 A C G T C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ADTTCAAATAGTACTG
ACATCAAAGG------
 C T G A C A G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G T C A A T C G A C G T C G T A A G T C C G A T A T C G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T