Information for 16-CTGSTTGGKGTCM (Motif 25)

A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A
Reverse Opposite:
A C G T A C T G C G T A A G T C G T A C A G T C A G T C C G T A G T C A A T G C G T A C C G T A A C T G
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.7 +/- 14.6bp
Average Position of motif in Background55.5 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTGSTTGGKGTCM
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGSTTGGKGTCM-----
-TNNNNGGTGTCATNTNT
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGSTTGGKGTCM----
-AGAGCGGGGTCAAGTA
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T
A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGSTTGGKGTCM-----
-NTNNNGGGGTCANGNNN
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGSTTGGKGTCM---
NTNTGGGGGGTCNNNA
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGSTTGGKGTCM-----
-CTCCAGGGGTCAATTGA
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGSTTGGKGTCM-----
-GGCGAGGGGTCAAGGGC
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGSTTGGKGTCM
-TGTCAGGGGGCG
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGSTTGGKGTCM----
-CGCGCCGGGTCACGTA
 A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T
A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGSTTGGKGTCM
NNVDGGGYGGGGCYN
 A C G T A C G T A G T C A C G T A C T G A T C G C A G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C G T C A
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A