Information for 11-GCTGCHATTGTTT (Motif 15)

A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A A G T C C G T A G T C A A C G T C A T G C T A G A G T C C G T A A T C G A G T C
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.848
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.7 +/- 22.1bp
Average Position of motif in Background32.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCTGCHATTGTTT
---NCCATTGTTY
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GCTGCHATTGTTT-
----CCATTGTTYB
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCTGCHATTGTTT
----CCATTGTTC
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCTGCHATTGTTT---
-NNNCCATTGTGTNAN
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCTGCHATTGTTT
---NCCATTGTTC
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTGCHATTGTTT-----
-CNNNTATTGTTCNNNNN
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:GCTGCHATTGTTT--
------ATTGTTTAN
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCTGCHATTGTTT-
----CCATTGTTNY
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCHATTGTTT
AACACTGCAATTGTTC
 A C G T A C G T A C G T A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCTGCHATTGTTT-
----CCATTGTTTT
 A C T G A T G C A C G T A C T G A G T C G A T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T