Information for 23-ACCATGCATGCAT (Motif 33)

C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T
Reverse Opposite:
C G T A A C G T A T C G G A T C G C T A C G A T T A C G T A G C C G T A A C G T C A T G T A C G G A C T
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.692
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets64.5 +/- 23.1bp
Average Position of motif in Background64.6 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACCATGCATGCAT---
NNCATTCATTCATNNN
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACCATGCATGCAT---
-SCAGYCADGCATGAC
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACCATGCATGCAT-
GACCACATTCATACAAT
 A C G T A C G T A C G T C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACCATGCATGCAT------
--AAAATATGCATAATAAA
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACCATGCATGCAT------
-----ACATTCATGACACG
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACCATGCATGCAT----
-GCAGCCAAGCGTGACN
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:ACCATGCATGCAT----
-------ATGMATATDC
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PAX1/MA0779.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ACCATGCATGCAT----
NGCANTCATGCGTGACG
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:ACCATGCATGCAT----
-------ATGAATATTC
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0096.1_Zfp187_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ACCATGCATGCAT--
-TTATTAGTACATAN
 C T G A A G T C G T A C G T C A A C G T A C T G A G T C C G T A C A G T C A T G T A G C T G C A A C G T A C G T A C G T
A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A