Information for 21-CAAGGATTAACAT (Motif 32)

T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T
Reverse Opposite:
G T C A C G A T A C T G C G A T C G A T G T C A C G T A A C G T G T A C G T A C A C G T C A G T A C T G
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.688
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets46.4 +/- 23.3bp
Average Position of motif in Background38.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAAGGATTAACAT
-VRGGATTARN--
 T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAAGGATTAACAT-
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAAGGATTAACAT
--NGGATTAA---
 T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGATTAACAT--
NNAAGGGATTAACGANT
 A C G T A C G T T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAAGGATTAACAT
--GGGATTAA---
 T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAAGGATTAACAT--
TGAAGGGATTAATCATC
 A C G T A C G T T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAAGGATTAACAT
---GGATTAGC--
 T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAGGATTAACAT
AGTTAATGATTAACT-
 A C G T A C G T A C G T T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGATTAACAT--
NANAGGGATTAATTATN
 A C G T A C G T T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAAGGATTAACAT
--GGGATTANN--
 T G A C G T C A C G T A C A T G C A T G T G C A C G A T C A G T G C T A G C T A T G A C C G T A C A G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T